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DESeq2

An R package for differential gene expression analysis from RNA-seq count data. Uses negative binomial models and shrinkage to detect DE genes.

Example in a sentence

DESeq2 was used for normalization and DE testing.

Key facts

  • Negative binomial; shrinkage; R/Bioconductor.
  • Standard for RNA-seq DE.

Category: Analysis Methods

Authoritative references

Related terms

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DESeq2 | Bioinformatics Glossary | GENOS.bio