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FastQC

A quality control tool that generates reports on FASTQ files, base quality, GC content, adapter contamination, duplicate sequences. Used to assess library quality.

Example in a sentence

FastQC reports were checked before and after trimming.

Key facts

  • QC on FASTQ; no alignment needed.
  • Flags adapter, quality, GC issues.

Category: Analysis Methods

Authoritative references

Related terms

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FastQC | Bioinformatics Glossary | GENOS.bio